Escherichia coli strain FWSEC0121

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0121 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is 37°C, categorizing it as mesophilic. The strain typically exists in pairs or singles and is motile, possessing flagella that enhance its mobility. FWSEC0121 is associated with a diverse range of hosts, including humans (Homo sapiens), various mammals (e.g., Bos taurus, Sus scrofa, Canis lupus familiaris), birds (Aves), and certain plants (e.g., Solanum lycopersicum). This broad host range indicates the strain's versatility and adaptability in various ecological niches. The strain is implicated in numerous health effects, particularly in humans, where it can cause urinary tract infections, gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The diverse pathogenic effects underline its significance in clinical microbiology and public health, particularly in relation to foodborne illnesses and infections. Given its free-living biotic relationship and capacity to infect multiple hosts, E. coli FWSEC0121 exemplifies the complex interplay between microbial pathogens and their environments. Understanding its behavior and pathogenicity can provide insights into infection control and prevention strategies, particularly in clinical settings where it may lead to serious health outcomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0121

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0121
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0121 plasmid unnamed9

Gene Summary

Adenine Count

1331775 bp

Thymine Count

1339919 bp

Guanine Count

1374088 bp

Cytosine Count

1354005 bp

Genome Length

5413725 bp

Protein-coding Genes

5009 genes

Non-Coding Genes

355 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Lysozyme peptidaseC9Z71_00575Not AvailablePositive116975 - 11773026540.0
Trna-gly;Not AvailableNot AvailablePositive117809 - 117882Not Available
AttlNot AvailableNot AvailablePositive118032 - 118043Not Available
Putative prophage integraseC9Z71_00585Not AvailablePositive118047 - 11926146487.2
Putative repressor proteinC9Z71_00590Not AvailablePositive119805 - 1200087730.26
Antirepressor proteinC9Z71_00595Not AvailablePositive120073 - 12092132126.7
hypotheticalC9Z71_00600Not AvailablePositive120908 - 1211278494.04
Hypothetical proteinC9Z71_00605Not AvailablePositive121124 - 12205633512.0
hypotheticalC9Z71_00610Not AvailablePositive122049 - 12240912927.6
hypothetical proteinC9Z71_00615Not AvailablePositive122402 - 1225876578.01

Displaying genes 1 – 10 of 5368 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total