Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331775 bp
Thymine Count
1339919 bp
Guanine Count
1374088 bp
Cytosine Count
1354005 bp
Genome Length
5413725 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor h | C9Z71_21355 | Not Available | Negative | 4355164 - 4355778 | 22926.2 |
| rna ligase rtcb family protein | C9Z71_21360 | Not Available | Negative | 4355775 - 4356941 | 42590.9 |
| gnat family n-acetyltransferase | C9Z71_21365 | Not Available | Negative | 4357160 - 4357612 | 17561.2 |
| dna polymerase iv | C9Z71_21370 | Not Available | Negative | 4357609 - 4358664 | 39473.2 |
| putative lateral flagellar export/assembly protein lafu | C9Z71_21375 | Not Available | Negative | 4358735 - 4359505 | 28386.2 |
| type ii toxin-antitoxin system hica family toxin | C9Z71_21385 | Not Available | Positive | 4361309 - 4361587 | 10187.3 |
| type ii toxin-antitoxin system hicb family antitoxin | C9Z71_21390 | Not Available | Positive | 4361580 - 4361936 | 13400.8 |
| peptidoglycan endopeptidase | C9Z71_21395 | Not Available | Negative | 4361993 - 4362766 | 29736.5 |
| type ii toxin-antitoxin system antitoxin dinj | C9Z71_21400 | Not Available | Positive | 4362952 - 4363212 | 9392.3 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | C9Z71_21405 | Not Available | Positive | 4363215 - 4363493 | 10817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





