Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331775 bp
Thymine Count
1339919 bp
Guanine Count
1374088 bp
Cytosine Count
1354005 bp
Genome Length
5413725 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated fha domain protein tagh | C9Z71_21050 | Not Available | Negative | 4293080 - 4294360 | 47416.8 |
| type vi secretion system baseplate subunit tssg | C9Z71_21055 | Not Available | Negative | 4294385 - 4295467 | 40306.1 |
| type vi secretion system baseplate subunit tssf | C9Z71_21060 | Not Available | Negative | 4295431 - 4297281 | 71177.9 |
| type vi secretion system baseplate subunit tsse | C9Z71_21065 | Not Available | Negative | 4297285 - 4297698 | 15494.0 |
| type vi secretion system contractile sheath large subunit | C9Z71_21070 | Not Available | Negative | 4297705 - 4299180 | 55705.0 |
| hypothetical protein | C9Z71_21075 | Not Available | Negative | 4299231 - 4299455 | 8411.01 |
| type vi secretion system contractile sheath small subunit | C9Z71_21080 | Not Available | Negative | 4299490 - 4299990 | 18062.5 |
| hcp family type vi secretion system effector | C9Z71_21085 | Not Available | Positive | 4300687 - 4301205 | 19256.8 |
| type vi secretion system tip protein vgrg | C9Z71_21090 | Not Available | Positive | 4301415 - 4303316 | 71399.0 |
| duf1795 domain-containing protein | C9Z71_21095 | Not Available | Positive | 4303344 - 4303805 | 17319.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





