Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331775 bp
Thymine Count
1339919 bp
Guanine Count
1374088 bp
Cytosine Count
1354005 bp
Genome Length
5413725 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Z71_21000 | Not Available | Negative | 4279158 - 4280072 | 33993.4 |
| hcp family type vi secretion system effector | C9Z71_21005 | Not Available | Negative | 4280116 - 4280598 | 18000.5 |
| hypothetical protein | C9Z71_21010 | Not Available | Negative | 4280622 - 4281974 | 50726.4 |
| type vi secretion system membrane subunit tssm | C9Z71_21015 | Not Available | Negative | 4281985 - 4285419 | 130789.0 |
| type vi secretion system protein tssa | C9Z71_21020 | Not Available | Negative | 4285528 - 4286940 | 52358.2 |
| type vi secretion system-associated protein tago | C9Z71_21025 | Not Available | Negative | 4286945 - 4287688 | 26462.8 |
| type vi secretion system atpase tssh | C9Z71_21030 | Not Available | Negative | 4287685 - 4290450 | 100980.0 |
| dotu family type iv/vi secretion system protein | C9Z71_21035 | Not Available | Negative | 4290459 - 4291220 | 29376.7 |
| type vi secretion system baseplate subunit tssk | C9Z71_21040 | Not Available | Negative | 4291225 - 4292556 | 49910.7 |
| type vi secretion system lipoprotein tssj | C9Z71_21045 | Not Available | Negative | 4292559 - 4293083 | 19395.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





