Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331775 bp
Thymine Count
1339919 bp
Guanine Count
1374088 bp
Cytosine Count
1354005 bp
Genome Length
5413725 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | C9Z71_16090 | Not Available | Positive | 3293866 - 3294177 | 12190.9 |
| helix-turn-helix domain-containing protein | C9Z71_16095 | Not Available | Positive | 3294178 - 3294468 | 10847.1 |
| copg family transcriptional regulator | C9Z71_16100 | Not Available | Positive | 3295073 - 3295291 | 8408.23 |
| hypothetical protein | C9Z71_16105 | Not Available | Positive | 3295510 - 3295752 | 9244.94 |
| formate dehydrogenase accessory protein fdhe | C9Z71_16110 | Not Available | Negative | 3296082 - 3297011 | 34672.5 |
| formate dehydrogenase cytochrome b556(fdo) subunit | C9Z71_16115 | Not Available | Negative | 3297008 - 3297643 | 24607.7 |
| formate dehydrogenase-o iron-sulfur subunit | C9Z71_16120 | Not Available | Negative | 3297640 - 3298542 | 33102.1 |
| formate dehydrogenase-n subunit alpha | C9Z71_16125 | Not Available | Negative | 3298555 - 3301605 | 112446.0 |
| sulfurtransferase fdhd | C9Z71_16130 | Not Available | Positive | 3301799 - 3302632 | 30533.8 |
| duf3829 domain-containing protein | C9Z71_16135 | Not Available | Positive | 3302785 - 3303825 | 38614.4 |
Pathways
881 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





