Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331775 bp
Thymine Count
1339919 bp
Guanine Count
1374088 bp
Cytosine Count
1354005 bp
Genome Length
5413725 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9Z71_15110 | Not Available | Negative | 3088480 - 3089583 | 40345.6 |
| transcriptional regulator nrdr | C9Z71_15115 | Not Available | Negative | 3089587 - 3089979 | 15076.2 |
| propionate--coa ligase | C9Z71_15120 | Not Available | Negative | 3090215 - 3092101 | 69439.8 |
| 2-methylcitrate dehydratase | C9Z71_15125 | Not Available | Negative | 3092141 - 3093592 | 53984.8 |
| 2-methylcitrate synthase | C9Z71_15130 | Not Available | Negative | 3093626 - 3094795 | 43105.6 |
| methylisocitrate lyase | C9Z71_15135 | Not Available | Negative | 3094840 - 3095730 | 32137.5 |
| propionate catabolism operon regulatory protein prpr | C9Z71_15140 | Not Available | Positive | 3095969 - 3097555 | 58790.2 |
| duf1471 domain-containing protein | C9Z71_15145 | Not Available | Negative | 3097653 - 3097928 | 9929.94 |
| hypothetical protein | C9Z71_15150 | Not Available | Positive | 3098075 - 3098746 | 24826.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 3098998 - 3099078 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





