Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1213270 bp
Thymine Count
1217113 bp
Guanine Count
1261570 bp
Cytosine Count
1219397 bp
Genome Length
4918926 bp
Protein-coding Genes
4544 genes
Non-Coding Genes
295 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | C9Z67_23625 | Not Available | Negative | 4708107 - 4708310 | 7955.88 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9Z67_23635 | Not Available | Negative | 4708680 - 4712177 | 123786.0 |
| hypothetical protein | C9Z67_23655 | Not Available | Negative | 4714076 - 4714288 | 8121.01 |
| plasmid-partitioning protein sopa | C9Z67_23660 | Not Available | Positive | 4714244 - 4715410 | 43599.5 |
| parb/repb/spo0j family plasmid partition protein | C9Z67_23665 | Not Available | Positive | 4715410 - 4716381 | 35395.4 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | C9Z67_23670 | Not Available | Positive | 4716903 - 4717154 | 9181.89 |
| is4 family transposase | C9Z67_23700 | Not Available | Negative | 4719525 - 4719737 | 8138.08 |
| outer membrane protein assembly factor bamd | C9Z67_23705 | Not Available | Negative | 4719859 - 4720596 | 27830.9 |
| ribosomal large subunit pseudouridine synthase d | C9Z67_23710 | Not Available | Positive | 4720731 - 4721711 | 37109.8 |
| polyphenol oxidase | C9Z67_23715 | Not Available | Positive | 4721708 - 4722439 | 26358.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





