Escherichia coli strain FWSEC0117

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0117 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is 37°C, aligning with the mesophilic range, which is typical for many pathogenic bacteria. FWSEC0117 exhibits mobility and possesses flagella, enabling it to navigate its environment effectively. This strain is host-associated and has a diverse array of potential hosts, including Homo sapiens, various livestock species (such as Gallus gallus and Bos taurus), as well as a range of wildlife and plant species. This broad host range indicates its adaptability and potential for transmission across different ecological niches. FWSEC0117 is known to be free-living, which suggests that it can exist independently of a host under certain conditions. However, it is also associated with a wide spectrum of health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among others. The strain is implicated in severe conditions such as hemolytic uremic syndrome (HUS) and colibacillosis, emphasizing its pathogenic potential. The ecological insight from these traits highlights the significant role E. coli FWSEC0117 plays in both environmental ecosystems and human health. Its ability to inhabit various hosts and cause a range of infections underscores the importance of monitoring this strain, particularly in relation to food safety and public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0117

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0117
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0117 plasmid unnamed2

Gene Summary

Adenine Count

1213270 bp

Thymine Count

1217113 bp

Guanine Count

1261570 bp

Cytosine Count

1219397 bp

Genome Length

4918926 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

295 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multidrug efflux rnd transporter permease subunitC9Z67_00030Not AvailableNegative2771 - 5884113054.0
hypothetical proteinC9Z67_00035Not AvailableNegative6644 - 692510563.9
autotransporter strand-loop-strand o-heptosyltransferaseC9Z67_00040Not AvailablePositive7089 - 827345442.3
autotransporter outer membrane beta-barrel domain-containing proteinC9Z67_00045Not AvailablePositive8277 - 11450111544.0
nitrate/nitrite two-component system sensor histidine kinase narqC9Z67_00050Not AvailableNegative11537 - 1325564380.5
oxidoreductase fes-binding subunitC9Z67_00055Not AvailablePositive13461 - 1544071871.1
gdp-mannose pyrophosphatase nudkC9Z67_00060Not AvailablePositive15508 - 1608321723.0
duf1176 domain-containing proteinC9Z67_00065Not AvailablePositive16209 - 1725238834.6
transketolaseC9Z67_00070Not AvailableNegative17329 - 1933273082.9
transaldolase aC9Z67_00075Not AvailableNegative19352 - 2030235642.7

Displaying genes 281 – 290 of 4844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total