Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215642 bp
Thymine Count
1213841 bp
Guanine Count
1244280 bp
Cytosine Count
1257279 bp
Genome Length
4938066 bp
Protein-coding Genes
4425 genes
Non-Coding Genes
360 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase | C9Z66_08575 | Not Available | Positive | 1764294 - 1765148 | 30834.5 |
| fadr family transcriptional regulator | C9Z66_08585 | Not Available | Positive | 1765927 - 1766619 | 26063.5 |
| dha2 family efflux mfs transporter permease subunit | C9Z66_08590 | Not Available | Positive | 1766642 - 1768069 | 51431.8 |
| ribose operon repressor | C9Z66_08595 | Not Available | Negative | 1768035 - 1769027 | 36614.1 |
| ribokinase | C9Z66_08600 | Not Available | Negative | 1769031 - 1769960 | 32292.4 |
| ribose abc transporter substrate-binding protein rbsb | C9Z66_08605 | Not Available | Negative | 1770086 - 1770976 | 30940.2 |
| ribose abc transporter permease | C9Z66_08610 | Not Available | Negative | 1771001 - 1771966 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | C9Z66_08615 | Not Available | Negative | 1771971 - 1773476 | 54988.0 |
| d-ribose pyranase | C9Z66_08620 | Not Available | Negative | 1773484 - 1773903 | 15284.4 |
| low affinity potassium transport system protein kup | C9Z66_08625 | Not Available | Negative | 1774070 - 1775938 | 69298.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





