Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss effector protein nleh | C9Z63_25545 | Not Available | Positive | 5048642 - 5049523 | 32532.2 |
| type iii secretion system effector cif | C9Z63_25550 | Not Available | Positive | 5049747 - 5050577 | 31152.2 |
| protein ymfl | C9Z63_25570 | Not Available | Negative | 5051313 - 5051856 | 19928.5 |
| xre family transcriptional regulator | C9Z63_25575 | Not Available | Negative | 5051849 - 5052109 | 9763.64 |
| helix-turn-helix transcriptional regulator | C9Z63_25585 | Not Available | Positive | 5052207 - 5052899 | 25648.7 |
| hypothetical protein | C9Z63_25590 | Not Available | Negative | 5053219 - 5053734 | 18943.8 |
| gtpase family protein | C9Z63_25595 | Not Available | Positive | 5053941 - 5054555 | 23300.8 |
| dgtpase | C9Z63_25600 | Not Available | Positive | 5054773 - 5056551 | 66647.2 |
| 3'-5' exoribonuclease | C9Z63_25605 | Not Available | Positive | 5056552 - 5056621 | 2612.14 |
| duf4224 domain-containing protein | C9Z63_25610 | Not Available | Positive | 5056680 - 5056883 | 7646.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





