Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | C9Z63_15630 | Not Available | Negative | 3186695 - 3187816 | 42581.2 |
| two-component system sensor histidine kinase phoq | C9Z63_15635 | Not Available | Negative | 3187892 - 3189352 | 55336.8 |
| two-component system response regulator phop | C9Z63_15640 | Not Available | Negative | 3189352 - 3190023 | 25536.7 |
| adenylosuccinate lyase | C9Z63_15645 | Not Available | Negative | 3190191 - 3191561 | 51572.7 |
| lysogenization regulator hfld | C9Z63_15650 | Not Available | Negative | 3191565 - 3192206 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | C9Z63_15655 | Not Available | Negative | 3192242 - 3193348 | 40961.7 |
| nudix hydrolase | C9Z63_15660 | Not Available | Negative | 3193402 - 3193863 | 17433.8 |
| 23s rrna pseudouridine synthase e | C9Z63_15665 | Not Available | Negative | 3193873 - 3194526 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | C9Z63_15670 | Not Available | Positive | 3194698 - 3195948 | 45772.4 |
| anti-adapter protein iram | C9Z63_15675 | Not Available | Negative | 3196051 - 3196374 | 12180.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





