Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase, biosynthetic | C9Z63_15525 | Not Available | Negative | 3164221 - 3165765 | 56187.4 |
| dihydroxy-acid dehydratase | C9Z63_15530 | Not Available | Negative | 3165768 - 3167618 | 65535.4 |
| branched-chain-amino-acid transaminase | C9Z63_15535 | Not Available | Negative | 3167683 - 3168612 | 34081.5 |
| acetolactate synthase isozyme 2 small subunit | C9Z63_15540 | Not Available | Negative | 3168632 - 3168895 | 9703.74 |
| acetolactate synthase 2 catalytic subunit | C9Z63_15545 | Not Available | Negative | 3168892 - 3170538 | 59167.2 |
| hypothetical protein | C9Z63_15550 | Not Available | Negative | 3170541 - 3170591 | 1910.25 |
| ilvgmeda operon leader peptide | C9Z63_15555 | Not Available | Negative | 3170678 - 3170776 | 3231.32 |
| atp-dependent protease | C9Z63_15560 | Not Available | Positive | 3171130 - 3172650 | 55135.6 |
| macrodomain ori organization protein maop | C9Z63_15565 | Not Available | Negative | 3172675 - 3173013 | 13134.2 |
| transcriptional regulator | C9Z63_15570 | Not Available | Positive | 3173132 - 3173971 | 31778.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





