Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Z63_14870 | Not Available | Positive | 3032077 - 3032157 | 3111.7 |
| 50s ribosomal protein l34 | C9Z63_14875 | Not Available | Positive | 3032387 - 3032527 | 5380.74 |
| ribonuclease p protein component | C9Z63_14880 | Not Available | Positive | 3032544 - 3032903 | 13790.0 |
| membrane protein insertion efficiency factor yidd | C9Z63_14885 | Not Available | Positive | 3032867 - 3033124 | 9381.61 |
| membrane protein insertase yidc | C9Z63_14890 | Not Available | Positive | 3033127 - 3034773 | 61543.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C9Z63_14895 | Not Available | Positive | 3034879 - 3036243 | 49247.8 |
| tryptophanase leader peptide | C9Z63_14900 | Not Available | Positive | 3036486 - 3036560 | 2894.56 |
| tryptophanase | C9Z63_14905 | Not Available | Positive | 3036781 - 3038196 | 52776.4 |
| low affinity tryptophan permease tnab | C9Z63_14910 | Not Available | Positive | 3038287 - 3039534 | 45227.3 |
| multidrug efflux mfs transporter mdtl | C9Z63_14915 | Not Available | Positive | 3039666 - 3040841 | 41552.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





