Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpoe leader peptide rsed | C9Z63_13845 | Not Available | Positive | 2820448 - 2820603 | 6229.83 |
| ecf rna polymerase sigma-e factor | C9Z63_13850 | Not Available | Positive | 2820600 - 2821175 | 21697.0 |
| anti-sigma-e factor rsea | C9Z63_13855 | Not Available | Positive | 2821208 - 2821858 | 24322.8 |
| sigma-e factor regulatory protein rseb | C9Z63_13860 | Not Available | Positive | 2821858 - 2822814 | 35763.8 |
| soxr-reducing system protein rsec | C9Z63_13865 | Not Available | Positive | 2822811 - 2823290 | 16640.3 |
| elongation factor 4 | C9Z63_13870 | Not Available | Positive | 2823488 - 2825287 | 66574.1 |
| signal peptidase i | C9Z63_13875 | Not Available | Positive | 2825303 - 2826277 | 35948.3 |
| ribonuclease 3 | C9Z63_13880 | Not Available | Positive | 2826550 - 2827230 | 25551.6 |
| gtpase era | C9Z63_13885 | Not Available | Positive | 2827227 - 2828132 | 33798.1 |
| dna repair protein reco | C9Z63_13890 | Not Available | Positive | 2828144 - 2828872 | 27364.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





