Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf987 domain-containing protein | C9Z63_13790 | Not Available | Negative | 2812614 - 2812835 | 8411.2 |
| dna repair protein radc | C9Z63_13795 | Not Available | Negative | 2812898 - 2813374 | 17674.4 |
| antirestriction protein | C9Z63_13800 | Not Available | Negative | 2813390 - 2813869 | 18128.4 |
| duf945 domain-containing protein | C9Z63_13805 | Not Available | Negative | 2813951 - 2814772 | 31276.6 |
| hypothetical protein | C9Z63_13815 | Not Available | Negative | 2814993 - 2815403 | 15097.3 |
| hypothetical protein | C9Z63_13820 | Not Available | Negative | 2815419 - 2816102 | 25170.2 |
| patatin-like phospholipase family protein | C9Z63_13825 | Not Available | Negative | 2816105 - 2816235 | 5148.37 |
| atp-dependent rna helicase srmb | C9Z63_13830 | Not Available | Negative | 2816382 - 2817716 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | C9Z63_13835 | Not Available | Positive | 2817848 - 2818585 | 27209.4 |
| l-aspartate oxidase | C9Z63_13840 | Not Available | Negative | 2818570 - 2820192 | 60206.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





