Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | C9Z63_13290 | Not Available | Positive | 2721708 - 2722826 | 42635.3 |
| duf2335 domain-containing protein | C9Z63_13295 | Not Available | Negative | 2722903 - 2723370 | 17199.7 |
| hypothetical protein | C9Z63_13300 | Not Available | Negative | 2723348 - 2723551 | 7076.74 |
| spermidine/putrescine abc transporter permease | C9Z63_13305 | Not Available | Positive | 2723860 - 2724654 | 29112.7 |
| spermidine/putrescine-binding periplasmic protein | C9Z63_13310 | Not Available | Positive | 2724651 - 2725697 | 38855.0 |
| duf3592 domain-containing protein | C9Z63_13315 | Not Available | Positive | 2725755 - 2726216 | 17311.5 |
| tpm domain-containing protein | C9Z63_13320 | Not Available | Positive | 2726213 - 2727001 | 28906.7 |
| nad-dependent protein deacylase | C9Z63_13325 | Not Available | Negative | 2727140 - 2727961 | 30938.2 |
| n-acetylglucosamine kinase | C9Z63_13330 | Not Available | Negative | 2727977 - 2728888 | 33044.6 |
| lipoprotein-releasing abc transporter permease subunit lole | C9Z63_13335 | Not Available | Negative | 2728917 - 2730161 | 45347.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





