Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-cys peroxiredoxin | C9Z63_13140 | Not Available | Negative | 2693366 - 2693872 | 17836.3 |
| l-ala-d/l-glu epimerase | C9Z63_13145 | Not Available | Positive | 2693991 - 2694956 | 34637.9 |
| murein tripeptide amidase mpaa | C9Z63_13150 | Not Available | Negative | 2694931 - 2695659 | 26572.4 |
| sdr family oxidoreductase | C9Z63_13155 | Not Available | Negative | 2695968 - 2696606 | 23333.3 |
| alpha/beta hydrolase | C9Z63_13160 | Not Available | Negative | 2696624 - 2697556 | 34133.5 |
| alpha/beta hydrolase | C9Z63_13165 | Not Available | Negative | 2697556 - 2698476 | 33694.4 |
| lysr family transcriptional regulator | C9Z63_13170 | Not Available | Positive | 2698614 - 2699513 | 33510.9 |
| periplasmic murein peptide-binding protein | C9Z63_13175 | Not Available | Positive | 2699850 - 2701463 | 59903.3 |
| mechanosensitive ion channel family protein | C9Z63_13180 | Not Available | Negative | 2701514 - 2702545 | 38787.8 |
| duf2534 family protein | C9Z63_13185 | Not Available | Positive | 2702789 - 2703046 | 9339.82 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





