Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2543 family protein | C9Z63_12990 | Not Available | Negative | 2662485 - 2662730 | 9321.8 |
| apc family permease | C9Z63_12995 | Not Available | Negative | 2662864 - 2664249 | 50869.9 |
| hypothetical protein | C9Z63_13000 | Not Available | Negative | 2664239 - 2664403 | 5971.24 |
| gamma-glutamylputrescine synthetase puua | C9Z63_13005 | Not Available | Negative | 2664552 - 2665970 | 53210.3 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | C9Z63_13010 | Not Available | Positive | 2666182 - 2666946 | 28072.7 |
| transcriptional regulator | C9Z63_13015 | Not Available | Positive | 2666973 - 2667530 | 20092.8 |
| aldehyde dehydrogenase puuc | C9Z63_13020 | Not Available | Positive | 2667805 - 2669292 | 53447.6 |
| fad-binding oxidoreductase | C9Z63_13025 | Not Available | Positive | 2669294 - 2670574 | 47158.2 |
| 4-aminobutyrate transaminase | C9Z63_13030 | Not Available | Positive | 2670612 - 2671877 | 44730.7 |
| phage shock protein operon transcriptional activator | C9Z63_13035 | Not Available | Negative | 2671997 - 2672974 | 36962.6 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





