Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yciy family protein | C9Z63_12735 | Not Available | Positive | 2615887 - 2616060 | 7102.81 |
| voltage-gated potassium channel protein | C9Z63_12740 | Not Available | Negative | 2616115 - 2617368 | 46080.2 |
| ycii family protein | C9Z63_12745 | Not Available | Negative | 2617668 - 2617964 | 10602.6 |
| tonb system transport protein tonb | C9Z63_12750 | Not Available | Positive | 2618188 - 2618907 | 26037.6 |
| acyl-coa thioester hydrolase ycia | C9Z63_12755 | Not Available | Negative | 2618947 - 2619345 | 14231.4 |
| septation protein a | C9Z63_12760 | Not Available | Negative | 2619450 - 2619989 | 20791.3 |
| upf0259 family protein | C9Z63_12765 | Not Available | Negative | 2620019 - 2620762 | 26434.6 |
| outer membrane protein w | C9Z63_12775 | Not Available | Positive | 2621119 - 2621757 | 22929.1 |
| ferritin-like domain-containing protein | C9Z63_12780 | Not Available | Negative | 2621817 - 2622323 | 18967.5 |
| ycie/ycif family protein | C9Z63_12785 | Not Available | Negative | 2622369 - 2622869 | 18598.2 |
Pathways
350 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





