Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small toxic protein ibsb | C9Z63_12460 | Not Available | Negative | 2556810 - 2556866 | 2063.86 |
| small toxic protein ibsb | C9Z63_12465 | Not Available | Negative | 2557138 - 2557194 | 2063.86 |
| multidrug efflux rnd transporter subunit mdta | C9Z63_12470 | Not Available | Positive | 2557473 - 2558720 | 44443.8 |
| multidrug efflux rnd transporter permease subunit mdtb | C9Z63_12475 | Not Available | Positive | 2558720 - 2561842 | 112016.0 |
| multidrug efflux rnd transporter permease subunit mdtc | C9Z63_12480 | Not Available | Positive | 2561843 - 2564920 | 111127.0 |
| mfs transporter | C9Z63_12485 | Not Available | Positive | 2564921 - 2566336 | 50922.3 |
| two-component sensor histidine kinase | C9Z63_12490 | Not Available | Positive | 2566333 - 2567736 | 51994.4 |
| two-component system response regulator baer | C9Z63_12495 | Not Available | Positive | 2567733 - 2568455 | 27657.5 |
| duf1508 domain-containing protein | C9Z63_12500 | Not Available | Positive | 2568646 - 2568978 | 11995.8 |
| type ii toxin-antitoxin system pard family antitoxin | C9Z63_12505 | Not Available | Positive | 2569187 - 2569483 | 11294.6 |
Pathways
474 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





