Escherichia coli strain FWSEC0113

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0113 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. It is motile, possessing flagella, and typically exists in pairs or as single cells. This strain is mesophilic, with an optimal growth temperature of 37°C. FWSEC0113 is primarily associated with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and many others across different taxa, indicating a wide ecological range. Its biotic relationship is characterized as free-living, which may contribute to its adaptability in diverse environments. The strain is known to harbor a single replicon and features a double-membrane structure. Clinically, E. coli FWSEC0113 is implicated in numerous health issues, particularly urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). This strain's pathogenicity in humans underscores its potential impact on public health, as it can lead to serious complications including septicemia and renal failure. The extensive range of hosts and the significant health effects associated with strain FWSEC0113 highlight its ecological versatility and pathogenic potential. Understanding its interactions with various organisms can provide insights into disease transmission pathways and the microbial ecology within host environments, emphasizing the importance of monitoring this strain in clinical and ecological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0113

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0113 plasmid unnamed4

Gene Summary

Adenine Count

1299292 bp

Thymine Count

1304364 bp

Guanine Count

1328925 bp

Cytosine Count

1325029 bp

Genome Length

5271012 bp

Protein-coding Genes

4894 genes

Non-Coding Genes

318 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane assembly protein asmaC9Z63_12410Not AvailableNegative2543685 - 254553868967.0
dctp deaminaseC9Z63_12415Not AvailableNegative2545560 - 254614121222.4
uridine kinaseC9Z63_12420Not AvailableNegative2546233 - 254687424354.6
diguanylate cyclaseC9Z63_12425Not AvailablePositive2547192 - 2550509123952.0
dna-3-methyladenine glycosylase 2C9Z63_12430Not AvailableNegative2550548 - 255140531680.4
molecular chaperoneC9Z63_12435Not AvailablePositive2551539 - 255289149294.1
helix-hairpin-helix domain-containing proteinC9Z63_12440Not AvailableNegative2552903 - 255484371358.5
protein phosphatase 2c domain-containing proteinC9Z63_12445Not AvailableNegative2554840 - 255560127337.7
vwa domain-containing proteinC9Z63_12450Not AvailableNegative2555598 - 255625724191.9
type i toxin-antitoxin system ibs family toxinC9Z63_12455Not AvailableNegative2556478 - 25565372232.03

Displaying genes 2561 – 2570 of 5217 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total