Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoserine/phosphohydroxythreonine transaminase | C9Z63_11420 | Not Available | Positive | 2329663 - 2330751 | 39842.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C9Z63_11425 | Not Available | Positive | 2330822 - 2332105 | 46098.5 |
| metalloprotease | C9Z63_11430 | Not Available | Positive | 2332274 - 2333038 | 26768.7 |
| (d)cmp kinase | C9Z63_11435 | Not Available | Positive | 2333211 - 2333894 | 24747.8 |
| 30s ribosomal protein s1 | C9Z63_11440 | Not Available | Positive | 2334005 - 2335678 | 61161.5 |
| integration host factor subunit beta | C9Z63_11445 | Not Available | Positive | 2335838 - 2336122 | 10651.8 |
| comec family protein | C9Z63_11450 | Not Available | Positive | 2336329 - 2338593 | 84718.4 |
| lipid a abc transporter atp-binding protein/permease msba | C9Z63_11455 | Not Available | Positive | 2338630 - 2340378 | 64522.7 |
| tetraacyldisaccharide 4'-kinase | C9Z63_11460 | Not Available | Positive | 2340375 - 2341361 | 35595.3 |
| protein ycar | C9Z63_11470 | Not Available | Positive | 2342682 - 2342864 | 6855.35 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





