Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0113 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299292 bp
Thymine Count
1304364 bp
Guanine Count
1328925 bp
Cytosine Count
1325029 bp
Genome Length
5271012 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | C9Z63_05970 | Not Available | Negative | 1231136 - 1233487 | 90044.7 |
| l-ribulose-5-phosphate 4-epimerase | C9Z63_05975 | Not Available | Negative | 1233562 - 1234257 | 25387.3 |
| l-arabinose isomerase | C9Z63_05980 | Not Available | Negative | 1234457 - 1235959 | 56106.2 |
| ribulokinase | C9Z63_05985 | Not Available | Negative | 1235970 - 1237670 | 61074.6 |
| arabinose operon regulatory protein | C9Z63_05990 | Not Available | Positive | 1238009 - 1238887 | 33385.8 |
| deda family protein | C9Z63_05995 | Not Available | Positive | 1238973 - 1239737 | 28184.7 |
| thiamine abc transporter atp-binding protein | C9Z63_06000 | Not Available | Negative | 1239851 - 1240549 | 25041.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | C9Z63_06005 | Not Available | Negative | 1240533 - 1242143 | 59361.6 |
| thiamine abc transporter substrate binding subunit | C9Z63_06010 | Not Available | Negative | 1242119 - 1243102 | 36208.2 |
| hth-type transcriptional regulator sgrr | C9Z63_06015 | Not Available | Negative | 1243266 - 1244921 | 64019.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





