Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0105 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1246843 bp
Thymine Count
1245728 bp
Guanine Count
1275066 bp
Cytosine Count
1263733 bp
Genome Length
5042165 bp
Protein-coding Genes
4624 genes
Non-Coding Genes
326 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease | C9Z55_03405 | Not Available | Negative | 681393 - 682157 | 26768.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C9Z55_03410 | Not Available | Negative | 682326 - 683609 | 46098.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | C9Z55_03415 | Not Available | Negative | 683680 - 684768 | 39842.6 |
| duf421 domain-containing protein | C9Z55_03420 | Not Available | Negative | 684967 - 685659 | 26230.5 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | C9Z55_03425 | Not Available | Positive | 685789 - 687549 | 65668.1 |
| formate transporter foca | C9Z55_03430 | Not Available | Positive | 687955 - 688812 | 30992.6 |
| formate acetyltransferase 1 | C9Z55_03435 | Not Available | Positive | 688867 - 691149 | 85362.0 |
| pyruvate formate lyase 1-activating protein | C9Z55_03440 | Not Available | Positive | 691341 - 692081 | 28205.9 |
| nad(p)h oxidoreductase | C9Z55_03445 | Not Available | Negative | 692163 - 692753 | 23013.3 |
| lysr family transcriptional regulator | C9Z55_03450 | Not Available | Positive | 692853 - 693761 | 34250.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





