Escherichia coli strain FWSEC0105

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0105 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in varied oxygen environments. This strain is characterized by its mobility, facilitated by the presence of flagella, and it typically grows optimally at 37 degrees Celsius, placing it within the mesophilic temperature range. FWSEC0105 is primarily host-associated and has been identified in a wide array of hosts, including Homo sapiens (humans), Gallus gallus (chickens), various mammals, and even some plant species such as Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). Its free-living biotic relationship suggests that it can exist independently in the environment while also being part of the normal flora of various hosts. This strain is significant in health contexts, as it is associated with numerous health effects, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as hemolytic uremic syndrome (HUS) and bacterial meningitis. The diverse pathogenic potential of FWSEC0105 highlights its role in both human and veterinary medicine, affecting not only individual health but also posing risks in food safety due to its association with foodborne illnesses. The presence of FWSEC0105 across various hosts suggests its ecological versatility and adaptability. Its impact on host health, especially in relation to UTIs and gastrointestinal diseases, underscores the importance of monitoring and understanding this strain in both clinical and environmental microbiology contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0105

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0105 plasmid unnamed2

Gene Summary

Adenine Count

1246843 bp

Thymine Count

1245728 bp

Guanine Count

1275066 bp

Cytosine Count

1263733 bp

Genome Length

5042165 bp

Protein-coding Genes

4624 genes

Non-Coding Genes

326 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-cystine transporterC9Z55_01115Not AvailableNegative216259 - 21765048683.7
metal-dependent hydrolaseC9Z55_01120Not AvailableNegative217783 - 21837322385.7
hexitol phosphatase hxpbC9Z55_01125Not AvailableNegative218536 - 21920424339.7
hypothetical proteinC9Z55_01130Not AvailablePositive219351 - 21988720368.3
fructosamine kinase family proteinC9Z55_01135Not AvailableNegative219928 - 22078832551.5
endoribonuclease ghosC9Z55_01140Not AvailableNegative220894 - 22118410865.6
atp-dependent 6-phosphofructokinaseC9Z55_01145Not AvailableNegative221285 - 22221432427.9
duf481 domain-containing proteinC9Z55_01150Not AvailablePositive222501 - 22325927625.7
hypothetical proteinC9Z55_01155Not AvailableNegative223312 - 2234194115.44
threonine--trna ligaseC9Z55_01165Not AvailablePositive225984 - 22791274004.4

Displaying genes 511 – 520 of 4951 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total