Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0105 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1246843 bp
Thymine Count
1245728 bp
Guanine Count
1275066 bp
Cytosine Count
1263733 bp
Genome Length
5042165 bp
Protein-coding Genes
4624 genes
Non-Coding Genes
326 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | C9Z55_00565 | Not Available | Negative | 106912 - 108351 | 53169.2 |
| pqib family protein | C9Z55_00570 | Not Available | Negative | 108431 - 111064 | 94932.0 |
| paraquat-inducible membrane protein a | C9Z55_00575 | Not Available | Negative | 111033 - 112316 | 48308.3 |
| gaf domain-containing protein | C9Z55_00580 | Not Available | Positive | 112446 - 112943 | 18094.6 |
| rna chaperone proq | C9Z55_00585 | Not Available | Positive | 113040 - 113738 | 25791.9 |
| tail-specific protease | C9Z55_00590 | Not Available | Positive | 113758 - 115806 | 76637.3 |
| protease htpx | C9Z55_00595 | Not Available | Positive | 115998 - 116879 | 31959.3 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 118053 - 118149 | Not Available |
| mfs transporter | C9Z55_00600 | Not Available | Negative | 116925 - 118298 | 48154.7 |
| dna-binding transcriptional regulator kdgr | C9Z55_00605 | Not Available | Positive | 118475 - 119266 | 30031.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





