Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0105 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1246843 bp
Thymine Count
1245728 bp
Guanine Count
1275066 bp
Cytosine Count
1263733 bp
Genome Length
5042165 bp
Protein-coding Genes
4624 genes
Non-Coding Genes
326 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly protein lptd | C9Z55_05075 | Not Available | Negative | 1028103 - 1030457 | 89674.9 |
| co-chaperone djla | C9Z55_05080 | Not Available | Positive | 1030712 - 1031527 | 30581.2 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9Z55_05085 | Not Available | Negative | 1031644 - 1032303 | 24862.1 |
| rna polymerase-associated protein rapa | C9Z55_05090 | Not Available | Negative | 1032315 - 1035221 | 109775.0 |
| dna polymerase ii | C9Z55_05095 | Not Available | Negative | 1035386 - 1037737 | 90031.6 |
| l-ribulose-5-phosphate 4-epimerase | C9Z55_05100 | Not Available | Negative | 1037812 - 1038507 | 25548.4 |
| l-arabinose isomerase | C9Z55_05105 | Not Available | Negative | 1038676 - 1040178 | 56106.2 |
| ribulokinase | C9Z55_05110 | Not Available | Negative | 1040189 - 1041889 | 61129.7 |
| arabinose operon regulatory protein | C9Z55_05115 | Not Available | Positive | 1042228 - 1043106 | 33385.8 |
| deda family protein | C9Z55_05120 | Not Available | Positive | 1043192 - 1043956 | 28171.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





