Escherichia coli strain FWSEC0097

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0097 is a Gram-negative, rod-shaped bacterium that exhibits mobility and possesses flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It typically exists in pairs or singles and is mesophilic, with an optimal growth temperature of 37°C. FWSEC0097 is host-associated and has a diverse range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other vertebrates and invertebrates. Its biotic relationship is categorized as free-living, indicating its ability to survive independently in various environments. This strain is notable for its pathogenic potential in humans, being linked to a variety of health effects, such as urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and foodborne illnesses. The extensive list of associated health issues includes severe conditions like hemolytic uremic syndrome (HUS), septicemia, and complications related to pregnancy loss. The wide host range and the diverse diseases it can cause highlight the ecological versatility and adaptability of E. coli strain FWSEC0097. Its presence in both human and animal hosts suggests it plays a significant role in interspecies transmission of pathogenicity, raising concerns for public health, particularly in relation to food safety and zoonotic infections. This adaptability underscores the importance of monitoring and understanding such strains to mitigate their impact on health and disease spread.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0097

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0097
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0097


Gene Summary

Adenine Count

1246232 bp

Thymine Count

1248033 bp

Guanine Count

1284481 bp

Cytosine Count

1277242 bp

Genome Length

5062563 bp

Protein-coding Genes

4612 genes

Non-Coding Genes

309 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-binding protein zintC9Z47_03035Not AvailableNegative655470 - 65614125495.0
sulfoxide reductase heme-binding subunit yedzC9Z47_03040Not AvailableNegative656377 - 65701224067.6
sulfoxide reductaseC9Z47_03045Not AvailableNegative657013 - 65801737358.8
hydroxyisourate hydrolaseC9Z47_03050Not AvailableNegative658126 - 65853915537.6
dna-binding response regulator hprrC9Z47_03055Not AvailablePositive658672 - 65934325010.2
hamp domain-containing proteinC9Z47_03060Not AvailablePositive659343 - 66070151018.9
dna cytosine methyltransferaseC9Z47_03080Not AvailablePositive662810 - 66422853498.8
very short patch repair endonucleaseC9Z47_03085Not AvailablePositive664209 - 66467917868.5
drug/metabolite exporter yedaC9Z47_03090Not AvailableNegative664668 - 66558832181.0
duf808 domain-containing proteinC9Z47_03095Not AvailablePositive665761 - 66667832134.7

Displaying genes 911 – 920 of 4931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total