Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0094 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362547 bp
Thymine Count
1361568 bp
Guanine Count
1392088 bp
Cytosine Count
1369014 bp
Genome Length
5500607 bp
Protein-coding Genes
5094 genes
Non-Coding Genes
394 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee inner membrane ring protein escd | C9Z44_02340 | Not Available | Positive | 489385 - 490605 | 45226.7 |
| intimin | C9Z44_02345 | Not Available | Negative | 490820 - 493639 | 101690.0 |
| type iii secretion system lee chaperone cest | C9Z44_02350 | Not Available | Negative | 493700 - 494170 | 17721.9 |
| type iii secretion system lee translocated intimin receptor tir | C9Z44_02355 | Not Available | Negative | 494303 - 495919 | 55423.1 |
| t3ss effector protein map | C9Z44_02360 | Not Available | Negative | 496366 - 496977 | 22643.2 |
| tir chaperone family protein | C9Z44_02365 | Not Available | Positive | 497228 - 497587 | 13781.4 |
| secretion protein esph | C9Z44_02370 | Not Available | Negative | 497806 - 498321 | 19561.3 |
| type iii secretion system protein sepq | C9Z44_02375 | Not Available | Negative | 498352 - 499269 | 34971.9 |
| duf1106 domain-containing protein | C9Z44_02380 | Not Available | Negative | 499232 - 499648 | 16348.6 |
| type iii secretion protein | C9Z44_02385 | Not Available | Negative | 499641 - 499961 | 12362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





