Escherichia coli strain FWSEC0094

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0094 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and demonstrates mobility due to the presence of flagella. This strain is primarily host-associated, with a diverse range of hosts including Homo sapiens, Gallus gallus, Bos taurus, and various other mammals, birds, and even some plants like Solanum lycopersicum and Brassica oleracea var. italica. The optimal growth temperature for FWSEC0094 is 37°C, categorizing it as mesophilic with a temperature range suitable for growth in warm-blooded hosts. FWSEC0094 is notable for its association with various health effects, particularly in humans, where it is implicated in conditions such as urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. The strain is also linked to more severe health issues, including hemolytic uremic syndrome (HUS), septicemia, and even certain cancers, illustrating its pathogenic potential. Biologically, the presence of E. coli FWSEC0094 in multiple hosts suggests a versatile ecological role, functioning as a free-living organism that can thrive in diverse environments. Its pathogenicity highlights the importance of monitoring and understanding such strains in relation to public health, particularly in the context of foodborne infections and their implications for human health. The wide variety of diseases associated with FWSEC0094 underscores the need for ongoing research into its mechanisms of pathogenicity and transmission pathways.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0094

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0094
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0094 plasmid unnamed7

Gene Summary

Adenine Count

1362547 bp

Thymine Count

1361568 bp

Guanine Count

1392088 bp

Cytosine Count

1369014 bp

Genome Length

5500607 bp

Protein-coding Genes

5094 genes

Non-Coding Genes

394 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide deformylaseC9Z44_22925Not AvailablePositive4661552 - 466206119343.6
methionyl-trna formyltransferaseC9Z44_22930Not AvailablePositive4662076 - 466302334129.4
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbC9Z44_22935Not AvailablePositive4663069 - 466435848315.2
trk system potassium uptake protein trkaC9Z44_22940Not AvailablePositive4664380 - 466575650370.8
large-conductance mechanosensitive channel protein msclC9Z44_22945Not AvailablePositive4665886 - 466629614927.7
alternative ribosome-rescue factor aC9Z44_22950Not AvailableNegative4666293 - 46665118171.86
zn(2+)-responsive transcriptional regulatorC9Z44_22955Not AvailableNegative4666567 - 466699216180.4
duf1992 domain-containing proteinC9Z44_22960Not AvailableNegative4667003 - 466737113973.6
50s ribosomal protein l17C9Z44_22965Not AvailableNegative4667478 - 466786114365.4
dna-directed rna polymerase subunit alphaC9Z44_22970Not AvailableNegative4667902 - 466889136513.9

Displaying genes 4601 – 4610 of 5503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total