Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0094 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362547 bp
Thymine Count
1361568 bp
Guanine Count
1392088 bp
Cytosine Count
1369014 bp
Genome Length
5500607 bp
Protein-coding Genes
5094 genes
Non-Coding Genes
394 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase transcriptional activator flha | C9Z44_03975 | Not Available | Negative | 829400 - 831478 | 78540.7 |
| hydrogenase expression/formation protein hype | C9Z44_03980 | Not Available | Negative | 831552 - 832562 | 35096.6 |
| hydrogenase formation protein hypd | C9Z44_03985 | Not Available | Negative | 832559 - 833680 | 41366.7 |
| hydrogenase assembly protein hypc | C9Z44_03990 | Not Available | Negative | 833680 - 833952 | 9732.58 |
| hydrogenase nickel incorporation protein hypb | C9Z44_03995 | Not Available | Negative | 833943 - 834815 | 31566.8 |
| protein hypa | C9Z44_04000 | Not Available | Negative | 834819 - 835169 | 13168.9 |
| hypothetical protein | C9Z44_04005 | Not Available | Positive | 835075 - 835293 | 8011.78 |
| formate hydrogenlyase regulatory protein hyca | C9Z44_04010 | Not Available | Positive | 835381 - 835842 | 17627.9 |
| formate hydrogenlyase subunit 2 | C9Z44_04015 | Not Available | Positive | 835967 - 836578 | 21874.4 |
| formate hydrogenlyase subunit 3 | C9Z44_04020 | Not Available | Positive | 836575 - 838401 | 64212.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





