Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux mfs transporter ydee | C9Z43_02540 | Not Available | Positive | 511561 - 512748 | 42699.5 |
| protein mgts | C9Z43_02545 | Not Available | Positive | 512875 - 512970 | 3509.36 |
| diguanylate cyclase | C9Z43_02550 | Not Available | Negative | 513189 - 514079 | 33937.5 |
| ydei family stress tolerance ob fold protein | C9Z43_02555 | Not Available | Negative | 514334 - 514726 | 14134.9 |
| peptidyl-dipeptidase dcp | C9Z43_02560 | Not Available | Negative | 515091 - 517136 | 77554.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | C9Z43_02565 | Not Available | Positive | 517273 - 518019 | 27280.6 |
| gntr family transcriptional regulator | C9Z43_02570 | Not Available | Positive | 518108 - 518794 | 26589.7 |
| putative selenium delivery protein ydfz | C9Z43_02575 | Not Available | Positive | 518971 - 519174 | 7276.83 |
| mannitol dehydrogenase family protein | C9Z43_02580 | Not Available | Negative | 519210 - 520670 | 53761.4 |
| mfs transporter | C9Z43_02585 | Not Available | Negative | 520760 - 522127 | 49315.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





