Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C9Z43_22305 | Not Available | Positive | 4528276 - 4529460 | 41771.1 |
| branched-chain amino acid abc transporter permease | C9Z43_22310 | Not Available | Positive | 4529584 - 4530321 | 26095.1 |
| l-valine transporter subunit ygah | C9Z43_22315 | Not Available | Positive | 4530311 - 4530646 | 11996.2 |
| multidrug efflux transporter emrab transcriptional repressor emrr | C9Z43_22320 | Not Available | Positive | 4530737 - 4531267 | 20564.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | C9Z43_22325 | Not Available | Positive | 4531394 - 4532566 | 42724.5 |
| multidrug efflux mfs transporter permease subunit emrb | C9Z43_22330 | Not Available | Positive | 4532583 - 4534121 | 55627.7 |
| 2'-5' rna ligase | C9Z43_22335 | Not Available | Positive | 4534379 - 4535086 | 27731.2 |
| poly(a) polymerase | C9Z43_22340 | Not Available | Positive | 4535083 - 4536195 | 43161.8 |
| s-ribosylhomocysteine lyase | C9Z43_22345 | Not Available | Negative | 4536246 - 4536761 | 19417.3 |
| glutamate--cysteine ligase | C9Z43_22350 | Not Available | Negative | 4536911 - 4538467 | 58286.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





