Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated fha domain protein tagh | C9Z43_22055 | Not Available | Positive | 4479564 - 4480844 | 47359.8 |
| type vi secretion system lipoprotein tssj | C9Z43_22060 | Not Available | Positive | 4480841 - 4481365 | 19395.0 |
| type vi secretion system baseplate subunit tssk | C9Z43_22065 | Not Available | Positive | 4481368 - 4482699 | 49906.8 |
| dotu family type iv/vi secretion system protein | C9Z43_22070 | Not Available | Positive | 4482704 - 4483465 | 29425.8 |
| type vi secretion system atpase tssh | C9Z43_22075 | Not Available | Positive | 4483474 - 4486257 | 101622.0 |
| type vi secretion system-associated protein tago | C9Z43_22080 | Not Available | Positive | 4486254 - 4486997 | 26445.8 |
| type vi secretion system protein tssa | C9Z43_22085 | Not Available | Positive | 4487002 - 4488414 | 52303.0 |
| type vi secretion system membrane subunit tssm | C9Z43_22090 | Not Available | Positive | 4488523 - 4491957 | 130907.0 |
| hypothetical protein | C9Z43_22095 | Not Available | Positive | 4491968 - 4493317 | 50853.8 |
| hcp family type vi secretion system effector | C9Z43_22100 | Not Available | Positive | 4493344 - 4493823 | 17897.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





