Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase type 1 tsac | C9Z43_21395 | Not Available | Negative | 4355988 - 4356560 | 20640.8 |
| hypothetical protein | C9Z43_21400 | Not Available | Negative | 4356565 - 4357107 | 19845.9 |
| duf494 domain-containing protein | C9Z43_21405 | Not Available | Negative | 4357136 - 4357609 | 18484.2 |
| dna-protecting protein dpra | C9Z43_21410 | Not Available | Negative | 4357581 - 4358705 | 40995.3 |
| peptide deformylase | C9Z43_21415 | Not Available | Positive | 4358835 - 4359344 | 19343.6 |
| methionyl-trna formyltransferase | C9Z43_21420 | Not Available | Positive | 4359359 - 4360306 | 34156.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | C9Z43_21425 | Not Available | Positive | 4360352 - 4361641 | 48281.2 |
| trk system potassium uptake protein trka | C9Z43_21430 | Not Available | Positive | 4361663 - 4363039 | 50370.8 |
| large conductance mechanosensitive channel protein mscl | C9Z43_21435 | Not Available | Positive | 4363169 - 4363579 | 14987.7 |
| ribosome alternative rescue factor arfa | C9Z43_21440 | Not Available | Negative | 4363576 - 4363794 | 8199.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





