Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | C9Z43_21140 | Not Available | Negative | 4307660 - 4308376 | 25313.4 |
| yicc family protein | C9Z43_21145 | Not Available | Positive | 4308503 - 4309366 | 33146.8 |
| site-specific integrase | C9Z43_21150 | Not Available | Positive | 4309557 - 4310819 | 48827.2 |
| hypothetical protein | C9Z43_21155 | Not Available | Positive | 4310816 - 4311466 | 23672.8 |
| alpa family phage regulatory protein | C9Z43_21160 | Not Available | Positive | 4311853 - 4312068 | 8202.87 |
| carboxy terminal-processing peptidase | C9Z43_21165 | Not Available | Negative | 4312369 - 4314417 | 76611.3 |
| rna chaperone proq | C9Z43_21170 | Not Available | Negative | 4314437 - 4315135 | 25863.9 |
| gaf domain-containing protein | C9Z43_21175 | Not Available | Negative | 4315232 - 4315729 | 18120.7 |
| paraquat-inducible membrane protein a | C9Z43_21180 | Not Available | Positive | 4315859 - 4317142 | 48306.4 |
| pqib family protein | C9Z43_21185 | Not Available | Positive | 4317111 - 4319744 | 94937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





