Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | C9Z43_12475 | Not Available | Positive | 2600920 - 2601906 | 35989.1 |
| carbohydrate kinase | C9Z43_12480 | Not Available | Positive | 2601910 - 2603406 | 55223.1 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C9Z43_12485 | Not Available | Positive | 2603403 - 2604065 | 23517.2 |
| l-ribulose-5-phosphate 3-epimerase | C9Z43_12490 | Not Available | Positive | 2604058 - 2604918 | 32529.0 |
| l-ribulose-5-phosphate 4-epimerase sgbe | C9Z43_12495 | Not Available | Positive | 2604912 - 2605607 | 25532.2 |
| arac family transcriptional regulator | C9Z43_12500 | Not Available | Negative | 2605639 - 2606454 | 31494.0 |
| mfs transporter | C9Z43_12505 | Not Available | Positive | 2606680 - 2608080 | 51425.9 |
| glycoside hydrolase family 127 protein | C9Z43_12510 | Not Available | Positive | 2608091 - 2610070 | 75406.4 |
| mipa/ompv family protein | C9Z43_12515 | Not Available | Negative | 2610191 - 2610931 | 27414.9 |
| lysr family transcriptional regulator | C9Z43_12520 | Not Available | Positive | 2611055 - 2612029 | 37344.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





