Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sulfur acceptor subunit csde | C9Z43_07935 | Not Available | Positive | 1621656 - 1622099 | 15925.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9Z43_07940 | Not Available | Negative | 1622150 - 1622956 | 28562.6 |
| murein transglycosylase a | C9Z43_07945 | Not Available | Negative | 1623033 - 1624130 | 40441.0 |
| Trna-met | Not Available | Not Available | Positive | 1624339 - 1624415 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1624449 - 1624525 | Not Available |
| type vi secretion system contractile sheath small subunit | C9Z43_07960 | Not Available | Positive | 1625157 - 1625657 | 18696.3 |
| type vi secretion system contractile sheath large subunit | C9Z43_07965 | Not Available | Positive | 1625716 - 1627254 | 57989.7 |
| type vi secretion system atpase tssh | C9Z43_07975 | Not Available | Positive | 1627673 - 1630318 | 97892.3 |
| type vi secretion system tip protein vgrg | C9Z43_07980 | Not Available | Positive | 1630330 - 1632819 | 91894.8 |
| glycine zipper family protein | C9Z43_07985 | Not Available | Positive | 1632813 - 1633703 | 31908.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





