Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose-proton symporter | C9Z43_07885 | Not Available | Positive | 1611349 - 1612665 | 47547.6 |
| l-fucose isomerase | C9Z43_07890 | Not Available | Positive | 1612698 - 1614473 | 65007.4 |
| l-fuculokinase | C9Z43_07895 | Not Available | Positive | 1614582 - 1616000 | 52231.6 |
| l-fucose mutarotase | C9Z43_07900 | Not Available | Positive | 1616002 - 1616424 | 15474.0 |
| l-fucose operon activator | C9Z43_07905 | Not Available | Positive | 1616482 - 1617213 | 27333.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | C9Z43_07910 | Not Available | Negative | 1617257 - 1618357 | 41907.5 |
| duf423 domain-containing protein | C9Z43_07915 | Not Available | Negative | 1618350 - 1618745 | 14334.0 |
| glycine cleavage system transcriptional activator | C9Z43_07920 | Not Available | Negative | 1618764 - 1619681 | 34403.4 |
| ygdi/ygdr family lipoprotein | C9Z43_07925 | Not Available | Negative | 1620032 - 1620259 | 8174.67 |
| cysteine desulfurase csda | C9Z43_07930 | Not Available | Positive | 1620451 - 1621656 | 43271.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





