Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 2 | C9Z43_07480 | Not Available | Negative | 1524142 - 1524753 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | C9Z43_07485 | Not Available | Negative | 1524878 - 1525339 | 17627.9 |
| hypothetical protein | C9Z43_07490 | Not Available | Negative | 1525427 - 1525645 | 8011.78 |
| protein hypa | C9Z43_07495 | Not Available | Positive | 1525551 - 1525901 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | C9Z43_07500 | Not Available | Positive | 1525905 - 1526777 | 31566.8 |
| hydrogenase assembly protein hypc | C9Z43_07505 | Not Available | Positive | 1526768 - 1527040 | 9732.58 |
| hydrogenase formation protein hypd | C9Z43_07510 | Not Available | Positive | 1527040 - 1528161 | 41396.7 |
| hydrogenase expression/formation protein hype | C9Z43_07515 | Not Available | Positive | 1528158 - 1529168 | 35066.5 |
| formate hydrogenlyase transcriptional activator flha | C9Z43_07520 | Not Available | Positive | 1529242 - 1531320 | 78403.5 |
| transporter | C9Z43_07525 | Not Available | Positive | 1531365 - 1531793 | 14538.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





