Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321930 bp
Thymine Count
1327627 bp
Guanine Count
1355880 bp
Cytosine Count
1359524 bp
Genome Length
5376731 bp
Protein-coding Genes
4875 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C9Z43_05810 | Not Available | Positive | 1194556 - 1195626 | 39501.2 |
| trna guanosine(34) transglycosylase tgt | C9Z43_05815 | Not Available | Positive | 1195681 - 1196808 | 42596.1 |
| preprotein translocase subunit yajc | C9Z43_05820 | Not Available | Positive | 1196831 - 1197163 | 11887.9 |
| protein translocase subunit secd | C9Z43_05825 | Not Available | Positive | 1197191 - 1199038 | 66609.3 |
| protein translocase subunit secf | C9Z43_05830 | Not Available | Positive | 1199049 - 1200020 | 35384.6 |
| hnh nuclease family protein | C9Z43_05835 | Not Available | Positive | 1200150 - 1200497 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | C9Z43_05840 | Not Available | Negative | 1200535 - 1201419 | 33625.6 |
| duf3251 domain-containing protein | C9Z43_05845 | Not Available | Negative | 1201718 - 1202257 | 19581.6 |
| transcriptional regulator nrdr | C9Z43_05850 | Not Available | Positive | 1202408 - 1202857 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9Z43_05855 | Not Available | Positive | 1202861 - 1203964 | 40396.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





