Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | C9Z39_01800 | Not Available | Negative | 386025 - 387188 | 42599.9 |
| acid-sensing system dna-binding response regulator evga | C9Z39_01805 | Not Available | Positive | 387604 - 388218 | 22691.5 |
| sensor protein evgs | C9Z39_01810 | Not Available | Positive | 388223 - 391816 | 134750.0 |
| acetyl-coa--oxalate coa-transferase | C9Z39_01815 | Not Available | Negative | 391872 - 393017 | 41673.2 |
| transporter yfdv | C9Z39_01820 | Not Available | Negative | 393091 - 394035 | 33617.9 |
| oxalyl-coa decarboxylase | C9Z39_01825 | Not Available | Negative | 394105 - 395799 | 60584.8 |
| formyl-coa--oxalate coa-transferase | C9Z39_01830 | Not Available | Negative | 395853 - 397103 | 45830.7 |
| yfdx family protein | C9Z39_01835 | Not Available | Negative | 397616 - 398251 | 22978.5 |
| hypothetical protein | C9Z39_01840 | Not Available | Positive | 398547 - 398822 | 10162.5 |
| duf2545 family protein | C9Z39_01845 | Not Available | Negative | 398899 - 399141 | 8874.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





