Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor irea | C9Z39_23660 | Not Available | Negative | 4775099 - 4777147 | 75365.3 |
| laci family transcriptional regulator | C9Z39_23680 | Not Available | Negative | 4780330 - 4780975 | 24056.9 |
| hypothetical protein | C9Z39_23685 | Not Available | Negative | 4780976 - 4781442 | 17416.6 |
| paar domain-containing protein | C9Z39_23690 | Not Available | Negative | 4781529 - 4781795 | 8876.84 |
| hypothetical protein | C9Z39_23695 | Not Available | Negative | 4782160 - 4782984 | 30875.9 |
| lipase family protein | C9Z39_23700 | Not Available | Negative | 4782977 - 4784998 | 76523.3 |
| type vi secretion system tip protein vgrg | C9Z39_23705 | Not Available | Negative | 4785001 - 4787532 | 93164.0 |
| type vi secretion protein | C9Z39_23710 | Not Available | Negative | 4787519 - 4788061 | 20392.5 |
| type iv secretion protein rhs | C9Z39_23715 | Not Available | Negative | 4788055 - 4788621 | 21946.2 |
| tonb-dependent vitamin b12 receptor btub | C9Z39_23775 | Not Available | Positive | 4797403 - 4799247 | 69084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





