Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C9Z39_00470 | Not Available | Positive | 91501 - 93261 | 65655.0 |
| formate transporter foca | C9Z39_00475 | Not Available | Positive | 93667 - 94524 | 30992.6 |
| formate acetyltransferase 1 | C9Z39_00480 | Not Available | Positive | 94579 - 96861 | 85362.0 |
| pyruvate formate lyase 1-activating protein | C9Z39_00485 | Not Available | Positive | 97053 - 97793 | 28205.9 |
| nad(p)h oxidoreductase | C9Z39_00490 | Not Available | Negative | 97875 - 98465 | 23037.4 |
| lysr family transcriptional regulator | C9Z39_00495 | Not Available | Positive | 98565 - 99473 | 34296.3 |
| inner membrane transporter ycam | C9Z39_00500 | Not Available | Negative | 99474 - 100904 | 52499.5 |
| mfs transporter | C9Z39_00505 | Not Available | Negative | 101114 - 102262 | 41434.2 |
| hydrolase | C9Z39_00510 | Not Available | Positive | 102576 - 103202 | 23101.5 |
| dimethyl sulfoxide reductase subunit c | C9Z39_00515 | Not Available | Negative | 103237 - 104100 | 30828.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





