Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9Z39_20975 | Not Available | Negative | 4251095 - 4252543 | 51723.0 |
| l-2-hydroxyglutarate oxidase | C9Z39_20980 | Not Available | Negative | 4252566 - 4253834 | 46070.6 |
| protein csid | C9Z39_20985 | Not Available | Negative | 4253854 - 4254831 | 37362.5 |
| hypothetical protein | C9Z39_20995 | Not Available | Negative | 4257087 - 4257419 | 12436.8 |
| Trna-met | Not Available | Not Available | Positive | 4257979 - 4258054 | Not Available |
| dna invertase | C9Z39_21010 | Not Available | Positive | 4260541 - 4260750 | 7767.67 |
| atpase | C9Z39_21015 | Not Available | Positive | 4260905 - 4261024 | 4328.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9Z39_21020 | Not Available | Positive | 4261089 - 4265669 | 157474.0 |
| protein phna | C9Z39_21030 | Not Available | Negative | 4266665 - 4267000 | 12345.7 |
| clamp-binding protein crfc | C9Z39_21035 | Not Available | Positive | 4267401 - 4269629 | 84375.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





