Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Z39_20095 | Not Available | Negative | 4094883 - 4096418 | 57239.0 |
| autotransporter adhesin ag43 | C9Z39_20100 | Not Available | Negative | 4096539 - 4098314 | 61904.7 |
| rhs repeat protein | C9Z39_20105 | Not Available | Positive | 4098315 - 4099059 | 27106.7 |
| hypothetical protein | C9Z39_20110 | Not Available | Positive | 4099043 - 4099525 | 18907.8 |
| hypothetical protein | C9Z39_20115 | Not Available | Negative | 4099440 - 4099625 | 7383.19 |
| isas1-like element isec5 family transposase | C9Z39_20125 | Not Available | Positive | 4100937 - 4102073 | 43034.9 |
| inner membrane transport permease yhhj | C9Z39_20130 | Not Available | Negative | 4102238 - 4103362 | 41064.2 |
| abc transporter atp-binding protein/permease | C9Z39_20135 | Not Available | Negative | 4103362 - 4106097 | 100791.0 |
| hlyd family secretion protein | C9Z39_20140 | Not Available | Negative | 4106094 - 4107161 | 38830.6 |
| duf4049 domain-containing protein | C9Z39_20145 | Not Available | Negative | 4107527 - 4109149 | 61153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





