Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | C9Z39_19305 | Not Available | Negative | 3945202 - 3947001 | 66574.1 |
| soxr-reducing system protein rsec | C9Z39_19310 | Not Available | Negative | 3947199 - 3947678 | 16640.3 |
| sigma-e factor regulatory protein rseb | C9Z39_19315 | Not Available | Negative | 3947675 - 3948631 | 35751.8 |
| anti-sigma-e factor rsea | C9Z39_19320 | Not Available | Negative | 3948631 - 3949281 | 24322.8 |
| ecf rna polymerase sigma-e factor | C9Z39_19325 | Not Available | Negative | 3949314 - 3949889 | 21697.0 |
| rpoe leader peptide rsed | C9Z39_19330 | Not Available | Negative | 3949886 - 3950041 | 6229.83 |
| l-aspartate oxidase | C9Z39_19335 | Not Available | Positive | 3950297 - 3951919 | 60340.9 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | C9Z39_19340 | Not Available | Negative | 3951904 - 3952641 | 27271.4 |
| atp-dependent rna helicase srmb | C9Z39_19345 | Not Available | Positive | 3952773 - 3954107 | 49927.0 |
| lysr family transcriptional regulator | C9Z39_19350 | Not Available | Negative | 3954316 - 3955197 | 33245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





