Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit dham | C9Z39_17265 | Not Available | Positive | 3555063 - 3556481 | 51451.5 |
| trehalase | C9Z39_17270 | Not Available | Positive | 3556801 - 3558498 | 63639.0 |
| hypothetical protein | C9Z39_17275 | Not Available | Negative | 3558577 - 3559017 | 16695.8 |
| glsb/yeaq/ymge family stress response membrane protein | C9Z39_17280 | Not Available | Negative | 3559195 - 3559449 | 8775.33 |
| flagellar brake protein ycgr | C9Z39_17285 | Not Available | Positive | 3559650 - 3560384 | 27858.8 |
| murein transglycosylase | C9Z39_17290 | Not Available | Negative | 3560386 - 3560997 | 22227.8 |
| murein tetrapeptide carboxypeptidase | C9Z39_17295 | Not Available | Positive | 3561097 - 3562011 | 33569.5 |
| k+/h+ antiporter nhap2 | C9Z39_17300 | Not Available | Positive | 3562106 - 3563842 | 62289.2 |
| alanine racemase catabolic | C9Z39_17305 | Not Available | Negative | 3564228 - 3565298 | 38846.9 |
| d-amino acid dehydrogenase | C9Z39_17310 | Not Available | Negative | 3565308 - 3566606 | 47610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





