Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-allulose-6-phosphate 3-epimerase | C9Z39_12905 | Not Available | Negative | 2697765 - 2698460 | 26110.7 |
| d-allose abc transporter permease | C9Z39_12910 | Not Available | Negative | 2698471 - 2699451 | 34317.8 |
| d-allose import atp-binding protein alsa | C9Z39_12915 | Not Available | Negative | 2699430 - 2700962 | 56748.3 |
| d-allose-binding periplasmic protein | C9Z39_12920 | Not Available | Negative | 2701089 - 2702024 | 32911.7 |
| murr/rpir family transcriptional regulator | C9Z39_12925 | Not Available | Negative | 2702083 - 2702973 | 32364.1 |
| ribose 5-phosphate isomerase b | C9Z39_12930 | Not Available | Positive | 2703332 - 2703781 | 16074.3 |
| protein yjdp | C9Z39_12935 | Not Available | Positive | 2703850 - 2704179 | 13469.4 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | C9Z39_12940 | Not Available | Negative | 2704326 - 2705084 | 27849.3 |
| protein phno | C9Z39_12945 | Not Available | Negative | 2705086 - 2705520 | 16570.8 |
| ribose 1,5-bisphosphate phosphokinase phnn | C9Z39_12950 | Not Available | Negative | 2705507 - 2706064 | 20730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





