Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | C9Z39_12190 | Not Available | Negative | 2537987 - 2539198 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | C9Z39_12195 | Not Available | Negative | 2539337 - 2540425 | 37530.1 |
| rod shape-determining protein roda | C9Z39_12200 | Not Available | Negative | 2540436 - 2541548 | 40478.6 |
| penicillin-binding protein 2 | C9Z39_12205 | Not Available | Negative | 2541551 - 2543452 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C9Z39_12210 | Not Available | Negative | 2543483 - 2543950 | 17342.1 |
| ribosome silencing factor | C9Z39_12215 | Not Available | Negative | 2543954 - 2544271 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | C9Z39_12220 | Not Available | Negative | 2544531 - 2545142 | 23309.8 |
| nicotinate-nucleotide adenylyltransferase | C9Z39_12225 | Not Available | Negative | 2545166 - 2545807 | 24529.3 |
| dna polymerase iii subunit delta | C9Z39_12230 | Not Available | Negative | 2545809 - 2546840 | 38706.0 |
| lps assembly lipoprotein lpte | C9Z39_12235 | Not Available | Negative | 2546840 - 2547421 | 21357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





